Omics Techniques and their Application to Genomic Medicine

Category:

This module will provide an overview of bioinformatics approaches to the analysis of genomic data. In addition there will be an introduction to different “omics technologies” and strategies to prioritise the pathogenicity of variants

From April 2019 we are introducing a new application process.

To apply for HEE funded modules please directly contact your chosen University. The application process flow chart can be found here.

HEE Commissioned places will be allocated on a modular basis only as funding is limited. Speak to your chosen University if you wish to complete more than one module leading to a PGCert, PGDip, or MSc qualification.

Course Description

This module will provide students with a critical understanding of ‘omics’ technologies, their interpretation and application in key areas of healthcare such as cancer, rare inherited diseases and infectious diseases, as well as research. A specific focus will be on the approaches supporting the 100,000 Genomes Project. The module will provide the underpinning knowledge to enable students to understand the data generated by the 100,000 Genomes Project and support those undertaking their research project.

Outline Of Syllabus

  • Basis of genotyping and detection of genetic variation.
  • Whole exome and whole genome sequencing, including library preparation methods, sequencing chemistries and platforms.
  • Genomic testing strategies as: gene focused, multiple genes, or whole genome or exome, and for detection of sequence, copy number or rearrangements.
  • Additional high throughput techniques including RNA expression profiling (expression array), RNA sequencing.
  • Current methods for detection of base substitutions (SNV), small insertions and deletions (indels), copy number variants (CNV) and rearrangements.
  • Proteomics techniques, Metabolomics, and integration/future directions.
  • Overview of bioinformatics approaches to the analysis of genomic data.
  • Approaches to the evaluation of pathogenicity of variants in the context of an NHS clinical report.

Additional information

Type of Course

CPPD Module

Course Options

CPPD (15 credits)

Mode of Study

Offline

Experience

Entry

Delivery

Part Time

University Providers

Imperial College London, Queen Marys University of London / University College London, St Georges, University of London, University of Birmingham, University of Cambridge, University of Manchester

Timetable

Start Date
University of BirminghamSeptember 2019
Newcastle University
University of ManchesterJanuary 2019
University of Sheffield
Imperial College LondonOctober 2018
Queen Marys University of London / University College LondonSeptember 2018
St George’s, University of London / King’s College LondonAutumn 2019
University of CambridgeNovember 2019
University of Southampton
University of ExeterNovember 2018

Please check the university providers websites for more detailed information about start dates, length and mode of study.

Funding Rules

Funding is limited to NHS healthcare professionals working in England from the full range of professional backgrounds and groups (such as medicine, nursing, healthcare scientists and technologists).  For those interested in CPPD modules, university entry requirements may include criteria around existing understanding and minimum English language requirements.

Not all universities offer the same CPPD modules. Please check with your preferred university to obtain details of the programme modules, entry criteria and timing before going through the funding application process.

Please download a visual flow diagram outlining the funding application and approval process.

Frequently Asked Questions

I have been awarded funding, started the programme but I am unable to complete the programme. What are my options?

Funding is awarded for CPPD modules only and there is no automatic ability to defer completion of the programme. You should speak to your preferred University provider in the first instance about your situation and also contact the Genomics Education Programme team regarding funding.

How much study time is required to undertake this programme?

Study time will vary across the delivery partners. You are advised to visit your preferred University website site for more information or to contact the relevant course lead. Most modules generally involve approximately 5 days of face to face teaching, followed by between 2-4 weeks of independent study and assessment preparation.

A distance learning option is provided at Queen Mary University of London.

Can I build up my CPPD modules to a full Master’s, PGDip or PGCert qualification?

The process and ability to do this will be dependent on your preferred University and you should contact them to discuss available options.

I am eligible but have been refused a commissioned place – why?

This may be due to the following potential reasons:

  • The University you have applied for has used up all its commissioned allocations
  • The total number of available national commissions have been fully allocated
  • We are now applying controls to the commissioned places based on healthcare profession roles to provide some equitable access across professions on a national scale
I am not eligible for a HEE funded commissioned place – can I self-fund?

This should be discussed with your preferred University

Do you have to have the university place confirmed before you submit an application for funding?

No – as long as the programme start date for your preferred University falls within the specified academic year for the funding application period.

I work for an organisation that provides services to the NHS – am I eligible to apply?

Yes – please provide details in the additional information section of the funding application form.

University Providers

Funded

The logos below indicate the university providers that are able to accept HEE funded applications for this course. Follow the links provided to begin your university application process.

Imperial College LondonQueen Marys University of London / University College LondonSt Georges, University of LondonUniversity of BirminghamUniversity of CambridgeUniversity of Manchester