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Example clinical scenario

A young woman attends the neurology clinic with mobility problems, and reports frequent trips and falls over the last few years. She also reports that her face looks different when compared with old photos. She finds soap in her eyes when she washes her hair, and she can no longer whistle or drink through a straw. She finds reaching for things above her head difficult.

When to consider genomic testing

  • Genomic testing should be considered if there are clinical features suggestive of facioscapulohumeral muscular dystrophy (FSHD). The typical history and examination findings for FSHD are of slowly progressive muscle weakness in a typical distribution involving the facial and shoulder girdle muscles with scapular winging (often asymmetric), weakness of trunk (protruding abdomen, lumbar lordosis) and weakness of leg muscles (foot drop and hamstring weakness).
  • Unaffected individuals may present with a family history of an adult-onset genetic condition. Where signs and/or symptoms suggestive of that condition are not present in the patient, they should be offered referral to a local clinical genetics service to discuss testing as part of a predictive (presymptomatic) testing pathway.
  • A genetic diagnosis may have implications for other family members, and can be particularly relevant during a pregnancy. For some genetic conditions, rapid testing is available for the purposes of pregnancy management. Assessment of symptoms during pregnancy and discussion of the patient’s choices regarding prenatal testing may be offered. If the patient or a close relative is pregnant, you may wish to offer them a referral to a local clinical genetics service for further discussion.

What do you need to do?

  • Consult the National Genomic Test Directory. From here you can access the rare and inherited disease eligibility criteria document for information about individual tests and their associated eligibility criteria. You can also access a spreadsheet containing details of all available tests.
  • To find out which genes are included on different gene panels, see the NHS Genomic Medicine Service (GMS) Signed Off Panels Resource.
  • Decide which of the panels best suits the needs of your patient and/or their family. For patients with symptoms of FSHD, two tests are available. They are known as FSHD1 and FSHD2.
    • R74 Facioscapulohumeral muscular dystrophy (also known as FSHD1) is the first-line test for suspected FSHD. It tests for the presence of DUX4 short tandem repeats (STRs). Repeat contractions are not yet reliably identified using whole genome sequencing (WGS).
    • R345 Facioscapulohumeral muscular dystrophy (also known as FSHD2) is the extended testing panel for FSHD, used in cases in which first-line testing for DUX4 contraction is negative.
  • For patients whose phenotype is atypical and/or FSHD1 and FSHD2 tests are negative, other panels can be considered.
    • R381 Other rare neuromuscular disorders. This test uses WGS.
  • For tests that do not include WGS, such as R74 and R345:
    • you should use your local Genomic Laboratory Hub test order and consent (record of discussion (RoD)) forms; and
    • bear in mind that, when testing in children, parental testing may inadvertently reveal an unexpected positive result (this is predictive or presymptomatic testing). Parental samples can be taken alongside that of the child (proband) and their DNA stored, or can be requested at a later date if needed.
  • For tests that are undertaken using WGS, such as R381, you will need to:
    • complete an NHS GMS test order form with details of the affected individual and their parents, including details of the phenotype (using human phenotype ontology (HPO) terms) and the appropriate panel name(s) with associated R number (see How to complete a test order form for WGS for support);
    • complete an NHS GMS RoD form for each person being tested – for example, if you are undertaking trio testing of an affected child and their parents, you will need three RoD forms (see How to complete a RoD form for support);
    • bear in mind that, when testing in children, parental samples may be needed for interpretation of the proband’s result, especially for larger WGS panels (samples can be taken alongside that of the proband, and their DNA stored, or can be requested at a later date if needed); and
    • submit a consultee form signed by an appropriate relative or advocate if an adult patient does not have capacity to consent to genomic testing.
  • All tests are DNA-based, and an EDTA sample (purple-topped tube) is required.
  • Information about patient eligibility and test indications were correct at the time of writing. When requesting a test, please refer to the National Genomic Test Directory to confirm the right test for your patient.

Resources

For clinicians

References:

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  • Last reviewed: 04/09/2023
  • Next review due: 04/09/2024
  • Authors: Dr Weijia Zhang
  • Reviewers: Dr Lianne Gompertz, Dr Emma Matthews, Dr Mary O’Driscoll