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Example clinical scenario

A 19-year-old woman presents with an iron deficiency anaemia. Her IgA-based tests are negative, without IgA deficiency. But, as her sister and first-degree cousin have coeliac disease, she has an endoscopy with distal duodenal biopsies. These demonstrate villous atrophy (Marsh 3b).

When to consider genomic testing

  • HLA DQ2 and DQ8 genomic testing should be performed (once in a lifetime); under 1% of people with coeliac disease are negative for these causative variants.
    • A positive result does not confirm the disease, as it is also found in 30%–40% healthy Western population.
    • A negative result means that coeliac disease can almost certainly be excluded.
  • This is not a test currently available through the National Genomic Test Directory; however, testing is available through secondary care laboratories.

What do you need to do?

Resources

For clinicians

Resources:

For patients

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  • Last reviewed: 11/03/2026
  • Next review due: 11/03/2028
  • Authors: Dr Suzanne Donnelly
  • Reviewers: Dr Kevin Monahan