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Example clinical scenario

A woman books her pregnancy at eight weeks’ gestation. She had a previous intrauterine death (IUD) at 35 weeks’ gestation. All appropriate fetal loss tests were completed following the birth, and the autopsy identified some structural malformations. She and her partner of worried that there may be a genetic cause for their loss, and they want to better understand the risks for future pregnancies.

When to consider genomic testing

  • Many stillbirths cannot be attributed to any cause. The most common identifiable cause of stillbirth is disorders of placental function, often manifesting as poor fetal growth.
  • Up to 1 in 4 (25%) of all stillbirths have a genetic cause. This is more likely when fetal structural anomalies are identified.
  • Genomic testing should be considered where:
    • fetal structural anomalies are identified prenatally and/or postnatally;
    • tissues or samples from the previous pregnancy are available; and/or
    • there is a family history of a genetic condition that could be relevant to the previous pregnancy.
  • Testing should be primarily targeted at cases in which it may influence future pregnancies.

What do you need to do?

  • Consult the National Genomic Test Directory. From here you can access the rare and inherited disease eligibility criteria for information about individual tests and their associated eligibility criteria. You can also access a spreadsheet of all available tests.
  • For information about the genes that are included on different gene panels, see the NHS Genomic Medicine Service (GMS) Signed Off Panels Resource.
  • Refer the pregnant woman for consultant-led care via local pathways.
  • If there is no clear cause for the previous pregnancy loss and a monogenic cause is felt to be likely, refer the case to clinical genetics services for review. Genomic testing in this situation is determined by multidisciplinary team review.
  • Genomic testing of previous pregnancies may be considered if the multidisciplinary team deems it appropriate, and tissues or samples are available.
    • Testing of fetuses with identified congenital anomalies with a likely genetic cause is ideally via R27 Paediatric disorders, or via R412 Fetal anomalies with a likely genetic cause (non urgent) where there is insufficient DNA for whole genome sequencing (WGS).
    • If the management of a current pregnancy would be altered by a genomic diagnosis, these processes can often be expedited. In this situation, testing via R14 (Acutely unwell children with a likely monogenic disorder) would be considered.
    • In the absence of identified congenital anomalies and other likely causes of death or stillbirth from 24 weeks’ gestation, more limited genomic testing is available. In this case, testing is via R22 Fetus with a likely chromosomal abnormality (see below).
  • Where there is a family history of a genetic condition relevant to the affected pregnancy, it may be possible to clarify the recurrence risk without testing the previous affected pregnancy – for example, by clarifying the carrier status of the parents.
    • If there is also evidence of fetal anomaly in a current pregnancy, the following testing may be considered for the current pregnancy:
      • R22 Fetus with a likely chromosomal abnormality. This will process both:
        • R22.1 Genome-wide common aneuploidy testing; and
        • R22.2 Chromosomal microarray.
        • Referral to clinical genetics and/or multidisciplinary discussion is required.
    • In this situation, it is important to alert the laboratory to the previous stillbirth and provide detailed information, especially if DNA from the previous pregnancy loss is available.
  • For tests that are undertaken using WGS, including R27 and R14, you will need to:
    • submit parental samples alongside the child’s sample (this is trio testing) to aid interpretation, especially for the larger WGS panels (where this is not possible, for example because the child is in care or the parents are unavailable for testing, the child may be submitted as a singleton).
  • For tests that do not include WGS, including R22 and R412:
    • parental samples may be needed for interpretation of the child’s result. Parental samples can be taken alongside that of the child, and their DNA stored, or can be requested at a later date if needed.
  • For R21 Fetal anomalies with a likely genetic cause, you will need to:
    • ensure that the required multidisciplinary discussions have taken place, including fetal medicine, clinical genetics and the regional specialist R21 laboratory, and that there is an agreement that R21 can be offered;
    • inform your local laboratory of the plan for R21 testing, so that they can arrange the necessary exports to the specialist R21 laboratories in a timely fashion;
    • send blood samples for both parents to the local laboratory (if only one parent is available, let the lab know – testing can still proceed, but there will be a small reduction in diagnostic yield); and
  • Note that, in Scotland, referral to clinical genetics is required for consideration of rapid prenatal exome testing.
  • All of the above tests are DNA based and require an amniocentesis or chorionic villus sample, or a fetal blood sample in an EDTA (typically purple-topped) tube. For more information about different sample types, see Samples for genomic testing in rare disease.
  • If you are discussing genomics concepts with your patients, you may find it helpful to use the visual communication aids for genomics conversations.
  • Information about patient eligibility and test indications was correct at the time of writing. When requesting a test, please refer to the National Genomic Test Directory to confirm the right test for your patient.

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  • Last reviewed: 14/11/2025
  • Next review due: 14/11/2026
  • Authors: Heather Longworth
  • Reviewers: Heidy Brandon, Dr Andrew Breeze, Dr Joanna Knight, Dr Jessica Woods